Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015910924.1_cds_XP_016460985.1_54355
CDS Infomation

[gene=LOC107784372] [db_xref=GeneID:107784372] [protein=zinc finger protein ZPR1-like] [protein_id=XP_016460985.1] [location=complement(join(18208..18332,19040..19145,19493..19584,19984..20092,23152..23241,23318..23388,24036..24102,24183..24450,28598..28725,28830..28889,29064..29120,29363..29407,30981..31062,31163..31203,31588..31632,32233..32364))] [gbkey=CDS]
Sequence

ATGGCGGGGACTAAGGAACAGATAATGGATGTTCGGTCTGTGGTGGAAGCAGTAACAGCC
GCCGGAGATGATGTTGAGATTGATACTCCTCTTTATGTTGTTGAAAGCCTCTGTATGCGC
TGTGGTGAAAATGGTACAACAAGGTTTCTCTTAACACTGATTCCACATTTTAGAAAGATA
TTATTGTCAGCATTTGACTGCCCACATTGTAGTGAAAGAAATAATGAAGTGGAGTTCGCT
GGTGAAATTCAGCCTCGAGGATGTTGCTATGGCTTGCATATTCCATCAGGTGATCAAAAG
ATGCTCGACCGAACGGTTGTCAAATCTGAAAGTGCTACCATCAAGATCCCTGAACTGGAT
TTTGAGATCCCCCCCGAGGCTCAGCGTGGATCATTGTCAACGGTAGAAGGCATACTGGTT
CGAGCTGCTGACGGTTTGGGGGCCCTTCAAGATGAACGGAAGAAAGTGGATCCCCAGATG
GCTGAAGCAATAGATCGGTTCTTGATAAAACTGAGAGCTTGTGCTTCAGGAGATTCATCC
TTTACTTTCATTCTTGATGATCCTGCTGGTAACAGCTTTATTGAGAACCCGTTAGCTCCA
TCTCCTGATCCCTCATTGAAAATCACATTCTATGAGCGAACTCCTGAGCAACAGGCAGCT
TTAGGGTATCTTGCCGACCCATCACAGCTTGGAGGACAAAGTGATGAGGTATCAAGTGAG
GGTATAAATAATGTTCCTCATCACCTGCTAAAGGAACCACATGGATCAGTTGGAGCAAGA
GCAGGACGTCAGGCTATTGCTCAGGGTAACAGTGCAGAAATAGCTGAAGCTCTATTTCGA
TATTCAGCTCCTGAAGAGGTGATGATGTTTCCATCAACTTGTGGAGCATGCGCTGCGAGG
TGTGACTGTAGAATGTTTGTTACCAATATTCCATACTTTCAAGAAGTAATAGTTATGGCA
TCCTCTTGTGATGCTTGTGGTTATCGCAACTCTGAGCTGAAACCTGGTGGTCCTATATCT
GATAAGGGAAAGAAAATTACCCTTCATGTGGAAAACATTGAAGACTTAAGCCGTGATGTG
ATTAAGTCTGATAGTGCTGGAGTGGAAATTCCTGAGCTTGAGTTAGAGCTTGCTAGTGGC
ACTTTGGGTGGAATGGTGACGACAGTTGAGGGTTTAATCACAAAAATTAACGAAAGTCTT
GAGAGAGTACATGGATTCACATTTGGAGACAGTCTTGATGAAGACAGGAAGAGCAAGTGG
TTGGACTTCCGAGCAAGACTAGACAAGCTTTTGAGCTTGGGACAACCGTGGACATTGATC
ATCGACGATGCACTTTCAAATTCTTTTGTTGCACCTGCAACCGATGATATCAAGGATGAC
AAACAGTTAACATTTGAAGATTACGTAAGATCGTGGGAGCAAAATGAGGAGCTGGGTCTT
AATGACATGGACACCACCTCAGCTGATGCTGCTTACAGTTCAGCAGATGCTGCACCCAGT
GAGAAAGCTGACGATTGA

Peptide Sequence

PEP ID

XP_016460985.1
PEP Infomation

PREDICTED: zinc finger protein ZPR1-like [Nicotiana tabacum]
Sequence

MAGTKEQIMDVRSVVEAVTAAGDDVEIDTPLYVVESLCMRCGENGTTRFLLTLIPHFRKI
LLSAFDCPHCSERNNEVEFAGEIQPRGCCYGLHIPSGDQKMLDRTVVKSESATIKIPELD
FEIPPEAQRGSLSTVEGILVRAADGLGALQDERKKVDPQMAEAIDRFLIKLRACASGDSS
FTFILDDPAGNSFIENPLAPSPDPSLKITFYERTPEQQAALGYLADPSQLGGQSDEVSSE
GINNVPHHLLKEPHGSVGARAGRQAIAQGNSAEIAEALFRYSAPEEVMMFPSTCGACAAR
CDCRMFVTNIPYFQEVIVMASSCDACGYRNSELKPGGPISDKGKKITLHVENIEDLSRDV
IKSDSAGVEIPELELELASGTLGGMVTTVEGLITKINESLERVHGFTFGDSLDEDRKSKW
LDFRARLDKLLSLGQPWTLIIDDALSNSFVAPATDDIKDDKQLTFEDYVRSWEQNEELGL
NDMDTTSADAAYSSADAAPSEKADD

Transcript Sequence

Gene sequence data has not been registered.